How do I design degenerate primers based on an alignment? – Geneious
Table 1 from Construction of "small-intelligent" focused mutagenesis libraries using well-designed combinatorial degenerate primers. | Semantic Scholar
Table 2.1 from An Iterative Beam Search Algorithm for Degenerate Primer Selection | Semantic Scholar
PANDAA intentionally violates conventional qPCR design to enable durable, mismatch-agnostic detection of highly polymorphic pathogens | Communications Biology
Wobbles / Degenerate Bases
Family-Specific Degenerate Primer Design: A Tool to Design Consensus Degenerated Oligonucleotides